BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031F07SP1|AL429436
(716 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1770 1376 0.0
>3x_Contig1770
Length = 29267
Score = 1376 bits (693), Expect = 0.0
Identities = 710/715 (99%), Gaps = 1/715 (0%)
Strand = Plus / Minus
Query: 1 ggttcgatgagggtttctttacaacgaatttggcttgtcttgctgctgcagcaatgctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27972 ggttcgatgagggtttctttacaacgaatttggcttgtcttgctgctgcagcaatgctct 27913
Query: 61 cacttgtagcgtccgtagaagccctacggatagtgttccttaacagcggatctctaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27912 cacttgtagcgtccgtagaagccctacggatagtgttccttaacagcggatctctaataa 27853
Query: 121 ttctgaacatctgtttctcgttttcttgcaggtgttttaagtcttatatacgcccttata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27852 ttctgaacatctgtttctcgttttcttgcaggtgttttaagtcttatatacgcccttata 27793
Query: 181 gatgtgcttctctcatgaacggagtatagtcattggtttaaaggtttgtctagttaagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27792 gatgtgcttctctcatgaacggagtatagtcattggtttaaaggtttgtctagttaagaa 27733
Query: 241 tcctttaaattctgtttagcttttcatgcttactgtggagcgaatgaaagatggagatag 300
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 27732 tcctttaaattctgtttagcttttcattcttactgtggagcgaatgaaagatggagatag 27673
Query: 301 agaagtggcaaagagggatctagccccccgctgctaggaaaactctgtaggagcatctaa 360
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 27672 agaagtggcaaagagggatctagccccc-gctgctaggaaaactctgtaggagcatctaa 27614
Query: 361 caatactagtaaatccacaaccataattcccctgttaatttccttggcctgaagtgatgg 420
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 27613 caatactagtaaatccacaacaaaaattcccctgttaatttccttggcctgaagtgatgg 27554
Query: 421 ttcatttgaagctagagacacttcggttgaacgatgaagatcagagcaccgggtccagct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27553 ttcatttgaagctagagacacttcggttgaacgatgaagatcagagcaccgggtccagct 27494
Query: 481 tgatcactcctagccgaacccagctctgcgatgaagtggtccgttggtggaaggaagaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27493 tgatcactcctagccgaacccagctctgcgatgaagtggtccgttggtggaaggaagaac 27434
Query: 541 cggctgccgaagatatgctgatagatacgttgtacgaacatttgatccgacgacgctcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27433 cggctgccgaagatatgctgatagatacgttgtacgaacatttgatccgacgacgctcca 27374
Query: 601 attggtcagtaaccaaagatgaattataccaagcattgaaatckcataaattgtacactc 660
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 27373 attggtcagtaaccaaagatgaattataccaagcattgaaatcgcataaattgtacactc 27314
Query: 661 cagagttgaacgaattggacagttatactggcgacatcagacccagtaccgttac 715
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27313 cagagttgaacgaattggacagttatactggcgacatcagacccagtaccgttac 27259
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4165
Number of Sequences: 1807
Number of extensions: 4165
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 1
length of query: 716
length of database: 10,358,551
effective HSP length: 16
effective length of query: 700
effective length of database: 10,329,639
effective search space: 7230747300
effective search space used: 7230747300
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)